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Computational Reproducibility Session using R

Date: 26. November 2025
Time: 14:00 - 15:30
Speaker: Luke Günther (Project S, CRC 1252)

Overview

Reproducible research workflows in R. We will cover R Markdown/Quarto, package management with renv, containerization options, Git workflows, and building reproducible pipelines.

Learning Objectives

  • Create dynamic documents with R Markdown/Quarto
  • Manage dependencies with renv
  • Understand containerization options (Docker, renv)
  • Apply version control best practices for R projects
  • Build reproducible analysis pipelines

Topics Covered

  • R Markdown and Quarto for dynamic documents
  • renv and dependency management
  • Containerization approaches
  • Version control for R projects
  • Reproducible pipeline patterns

Materials

  • Slides (to be added)
  • Example projects (to be added)
  • See schedule entry in agenda/winter-2025-26-schedule.md for context.